Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit a | DW035_03210 | Not Available | Positive | 779101 - 779451 | 12989.4 |
| nadh-quinone oxidoreductase subunit b | DW035_03215 | Not Available | Positive | 779442 - 780023 | 21882.7 |
| nadh-quinone oxidoreductase subunit d | DW035_03220 | Not Available | Positive | 780050 - 781669 | 61460.8 |
| nadh-quinone oxidoreductase subunit nuoh | DW035_03225 | Not Available | Positive | 781726 - 782817 | 40271.7 |
| nadh-quinone oxidoreductase subunit i | DW035_03230 | Not Available | Positive | 782834 - 783283 | 17208.2 |
| nadh-quinone oxidoreductase subunit j | DW035_03235 | Not Available | Positive | 783300 - 783815 | 18449.7 |
| nadh-quinone oxidoreductase subunit nuok | DW035_03240 | Not Available | Positive | 783828 - 784145 | 11768.7 |
| nadh-quinone oxidoreductase subunit l | DW035_03245 | Not Available | Positive | 784172 - 786061 | 69880.1 |
| nadh-quinone oxidoreductase subunit m | DW035_03250 | Not Available | Positive | 786083 - 787564 | 53819.9 |
| nadh-quinone oxidoreductase subunit n | DW035_03255 | Not Available | Positive | 787589 - 789007 | 51289.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

