Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonylcarbamoyl-amp synthase | DW035_03060 | Not Available | Positive | 727009 - 727575 | 20764.2 |
| cbs domain-containing protein | DW035_03065 | Not Available | Positive | 727588 - 729387 | 66480.2 |
| methionyl-trna formyltransferase | DW035_03070 | Not Available | Positive | 729403 - 730374 | 36208.2 |
| hypothetical protein | DW035_03075 | Not Available | Negative | 730390 - 731109 | 26695.7 |
| site-specific integrase | DW035_03080 | Not Available | Positive | 731499 - 732794 | 49370.7 |
| dna-binding protein | DW035_03085 | Not Available | Negative | 732887 - 733204 | 12438.0 |
| dna-binding protein | DW035_03090 | Not Available | Negative | 733206 - 733331 | 4998.8 |
| wg repeat-containing protein | DW035_03095 | Not Available | Negative | 733510 - 735165 | 63237.4 |
| hypothetical protein | DW035_03100 | Not Available | Negative | 735850 - 737229 | 52143.3 |
| hypothetical protein | DW035_03105 | Not Available | Positive | 737236 - 737598 | 14153.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

