Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DW035_02960 | Not Available | Negative | 702481 - 703200 | 26732.5 |
| rok family protein | DW035_02965 | Not Available | Positive | 703349 - 704323 | 34423.5 |
| duf4861 domain-containing protein | DW035_02970 | Not Available | Negative | 704383 - 705606 | 46132.6 |
| enoyl-acp reductase | DW035_02975 | Not Available | Positive | 705925 - 706782 | 31337.6 |
| gliding motility lipoprotein gldb | DW035_02980 | Not Available | Positive | 706789 - 707781 | 38987.1 |
| sam-dependent methyltransferase | DW035_02985 | Not Available | Positive | 707801 - 708505 | 26102.0 |
| hypothetical protein | DW035_02990 | Not Available | Negative | 708509 - 709579 | 40998.1 |
| lipoyl synthase | DW035_02995 | Not Available | Negative | 709554 - 710402 | 31639.1 |
| s9 family peptidase | DW035_03000 | Not Available | Negative | 710480 - 712678 | 83268.0 |
| energy transducer tonb | DW035_03005 | Not Available | Negative | 712703 - 714016 | 48818.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

