Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 590976 - 591052 | Not Available |
| hypothetical protein | DW035_02495 | Not Available | Negative | 591600 - 592577 | 37726.1 |
| dna primase | DW035_02500 | Not Available | Negative | 592574 - 594223 | 63980.5 |
| dna-binding protein | DW035_02505 | Not Available | Negative | 594213 - 594563 | 13617.5 |
| hypothetical protein | DW035_02510 | Not Available | Positive | 594600 - 595364 | 30113.9 |
| hypothetical protein | DW035_02515 | Not Available | Negative | 595689 - 596291 | 23428.8 |
| hypothetical protein | DW035_02520 | Not Available | Negative | 596366 - 597649 | 49081.5 |
| hypothetical protein | DW035_02525 | Not Available | Negative | 598000 - 598443 | 17492.1 |
| site-specific integrase | DW035_02530 | Not Available | Negative | 598628 - 599848 | 46284.6 |
| hypothetical protein | DW035_02535 | Not Available | Positive | 600126 - 601085 | 37195.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

