Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_02325 | Not Available | Positive | 558947 - 559231 | 10797.3 |
| duf3298 domain-containing protein | DW035_02330 | Not Available | Positive | 559245 - 560960 | 64308.4 |
| Trna-pro | Not Available | Not Available | Positive | 562154 - 562228 | Not Available |
| 3-dehydroquinate synthase | DW035_02350 | Not Available | Negative | 562337 - 563398 | 39642.7 |
| hypothetical protein | DW035_02355 | Not Available | Positive | 563500 - 563907 | 15576.9 |
| tonb-dependent receptor | DW035_02360 | Not Available | Positive | 563993 - 566890 | 107699.0 |
| cardiolipin synthase | DW035_02365 | Not Available | Positive | 566991 - 568424 | 55022.4 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | DW035_02370 | Not Available | Negative | 568384 - 568950 | 21770.1 |
| duf3822 family protein | DW035_02375 | Not Available | Negative | 568941 - 569765 | 31956.3 |
| hypothetical protein | DW035_02380 | Not Available | Negative | 569770 - 570456 | 25542.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

