Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4099 domain-containing protein | DW035_02270 | Not Available | Negative | 551180 - 552748 | 59737.0 |
| dna-binding protein | DW035_02275 | Not Available | Negative | 552769 - 553119 | 14053.0 |
| dna-binding protein | DW035_02280 | Not Available | Negative | 553122 - 553478 | 13378.1 |
| dna-binding protein | DW035_02290 | Not Available | Positive | 553759 - 554058 | 11622.4 |
| dna-binding protein | DW035_02295 | Not Available | Positive | 554090 - 554392 | 11740.2 |
| hypothetical protein | DW035_02300 | Not Available | Positive | 554563 - 554757 | 7083.53 |
| recombinase | DW035_02305 | Not Available | Negative | 554875 - 555780 | 34885.7 |
| 23s rrna (adenine(2058)-n(6))-methyltransferase erm(f) | DW035_02310 | Not Available | Negative | 555952 - 556752 | 30411.5 |
| hypothetical protein | DW035_02315 | Not Available | Negative | 556826 - 557191 | 13683.4 |
| is1595-like element isbun2 family transposase | DW035_02320 | Not Available | Negative | 557519 - 558484 | 37141.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

