Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4133 domain-containing protein | DW035_02165 | Not Available | Negative | 525927 - 526259 | 12696.9 |
| duf4134 domain-containing protein | DW035_02170 | Not Available | Negative | 526271 - 526588 | 10882.3 |
| conjugal transfer protein trad | DW035_02175 | Not Available | Negative | 526789 - 527529 | 27297.8 |
| duf3408 domain-containing protein | DW035_02180 | Not Available | Negative | 527526 - 527885 | 13384.2 |
| duf3408 domain-containing protein | DW035_02185 | Not Available | Negative | 527906 - 528355 | 17144.1 |
| para family protein | DW035_02190 | Not Available | Negative | 528361 - 529116 | 28423.4 |
| hypothetical protein | DW035_02200 | Not Available | Positive | 529577 - 529801 | 8260.19 |
| moba protein | DW035_02205 | Not Available | Positive | 529798 - 530226 | 16799.5 |
| relaxase | DW035_02210 | Not Available | Positive | 530205 - 531452 | 46727.9 |
| conjugal transfer protein trag | DW035_02215 | Not Available | Positive | 531483 - 533492 | 76729.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

