Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-protecting protein dpra | DW035_01755 | Not Available | Positive | 415796 - 416908 | 40544.1 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DW035_01760 | Not Available | Negative | 417118 - 417873 | 27442.3 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | DW035_01765 | Not Available | Negative | 417909 - 419891 | 73475.5 |
| succinate dehydrogenase/fumarate reductase cytochrome b subunit | DW035_01770 | Not Available | Negative | 419925 - 420614 | 25967.5 |
| s41 family peptidase | DW035_01775 | Not Available | Negative | 420878 - 422467 | 59688.3 |
| pantetheine-phosphate adenylyltransferase | DW035_01780 | Not Available | Negative | 422483 - 422938 | 17468.1 |
| type iia dna topoisomerase subunit b | DW035_01785 | Not Available | Negative | 422973 - 424910 | 73273.1 |
| n-acetyltransferase | DW035_01790 | Not Available | Negative | 424931 - 426061 | 43790.3 |
| duf3810 domain-containing protein | DW035_01795 | Not Available | Negative | 426377 - 427339 | 37193.5 |
| hypothetical protein | DW035_01800 | Not Available | Positive | 427526 - 428758 | 44173.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

