Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | DW035_01605 | Not Available | Negative | 370238 - 372235 | 76441.4 |
| methionine--trna ligase | DW035_01610 | Not Available | Positive | 372818 - 374860 | 77732.8 |
| lipopolysaccharide biosynthesis protein | DW035_01615 | Not Available | Positive | 374959 - 376404 | 53724.8 |
| glycosyltransferase | DW035_01620 | Not Available | Positive | 376462 - 377424 | 37303.1 |
| exopolysaccharide biosynthesis protein | DW035_01625 | Not Available | Positive | 377437 - 378456 | 38872.3 |
| glycosyltransferase | DW035_01630 | Not Available | Positive | 378458 - 379375 | 34931.6 |
| glycosyltransferase | DW035_01635 | Not Available | Positive | 379372 - 380421 | 40641.1 |
| glycosyltransferase | DW035_01640 | Not Available | Positive | 380477 - 381739 | 47503.6 |
| glycosyltransferase | DW035_01645 | Not Available | Positive | 381732 - 382496 | 29517.6 |
| hypothetical protein | DW035_01650 | Not Available | Negative | 382556 - 385045 | 92963.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

