Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abi family protein | DW035_16300 | Not Available | Negative | 3722598 - 3723497 | 35231.7 |
| hypothetical protein | DW035_16305 | Not Available | Positive | 3723682 - 3723993 | 11481.8 |
| duf4377 domain-containing protein | DW035_16310 | Not Available | Positive | 3724032 - 3724469 | 16506.8 |
| hypothetical protein | DW035_16315 | Not Available | Positive | 3724602 - 3725369 | 29388.7 |
| hypothetical protein | DW035_16320 | Not Available | Positive | 3725416 - 3725621 | 7467.87 |
| hypothetical protein | DW035_16325 | Not Available | Negative | 3725720 - 3726076 | 14089.9 |
| hypothetical protein | DW035_16330 | Not Available | Negative | 3726665 - 3726986 | 12387.4 |
| ankyrin repeat domain-containing protein | DW035_16335 | Not Available | Positive | 3727242 - 3727756 | 19343.8 |
| hypothetical protein | DW035_16340 | Not Available | Positive | 3727782 - 3728213 | 17224.6 |
| is3 family transposase | DW035_16345 | Not Available | Positive | 3728272 - 3728616 | 12887.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

