Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_16125 | Not Available | Positive | 3695622 - 3696020 | 15535.7 |
| duf4274 domain-containing protein | DW035_16135 | Not Available | Positive | 3696627 - 3697205 | 22898.7 |
| dna primase | DW035_16155 | Not Available | Positive | 3701720 - 3701872 | 5748.23 |
| atp-binding cassette domain-containing protein | DW035_16160 | Not Available | Positive | 3702121 - 3702960 | 31211.9 |
| hypothetical protein | DW035_16165 | Not Available | Positive | 3702971 - 3703852 | 34167.5 |
| gntr family transcriptional regulator | DW035_16170 | Not Available | Positive | 3703849 - 3704229 | 14796.0 |
| group ii intron reverse transcriptase/maturase | DW035_16175 | Not Available | Positive | 3704897 - 3706732 | 72038.6 |
| conjugal transfer protein trai | DW035_16180 | Not Available | Positive | 3706725 - 3706846 | 4740.88 |
| hypothetical protein | DW035_16185 | Not Available | Negative | 3706847 - 3707036 | 6966.64 |
| dna-binding protein | DW035_16190 | Not Available | Negative | 3707069 - 3707428 | 14545.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

