Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smi1/knr4 family protein | DW035_16025 | Not Available | Positive | 3681751 - 3682164 | 15636.4 |
| hypothetical protein | DW035_16030 | Not Available | Positive | 3682161 - 3683165 | 38379.8 |
| hypothetical protein | DW035_16035 | Not Available | Positive | 3683239 - 3683787 | 20942.2 |
| hypothetical protein | DW035_16040 | Not Available | Positive | 3683861 - 3684238 | 14598.1 |
| hypothetical protein | DW035_16045 | Not Available | Positive | 3684311 - 3684823 | 19511.5 |
| hypothetical protein | DW035_16050 | Not Available | Positive | 3684905 - 3685987 | 41312.5 |
| ankyrin repeat domain-containing protein | DW035_16055 | Not Available | Positive | 3686072 - 3686584 | 19544.1 |
| hypothetical protein | DW035_16060 | Not Available | Positive | 3686680 - 3687354 | 26107.6 |
| hypothetical protein | DW035_16065 | Not Available | Negative | 3687433 - 3687774 | 13200.9 |
| hypothetical protein | DW035_16070 | Not Available | Negative | 3687825 - 3688316 | 18800.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

