Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW035_15850 | Not Available | Negative | 3654050 - 3657223 | 117602.0 |
| transposase | DW035_15855 | Not Available | Positive | 3657718 - 3658578 | 32965.0 |
| hypothetical protein | DW035_15860 | Not Available | Negative | 3658717 - 3659346 | 24370.5 |
| hypothetical protein | DW035_15865 | Not Available | Negative | 3659429 - 3660400 | 37619.4 |
| recombinase | DW035_15870 | Not Available | Negative | 3660492 - 3661598 | 42685.4 |
| tetr/acrr family transcriptional regulator | DW035_15875 | Not Available | Negative | 3661696 - 3662310 | 23625.6 |
| hypothetical protein | DW035_15880 | Not Available | Negative | 3662451 - 3662600 | 5524.86 |
| hypothetical protein | DW035_15885 | Not Available | Negative | 3662862 - 3663317 | 16741.2 |
| hypothetical protein | DW035_15890 | Not Available | Negative | 3663324 - 3664535 | 45928.3 |
| conjugal transfer protein trag | DW035_15905 | Not Available | Positive | 3666935 - 3667486 | 20743.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

