Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | DW035_15620 | Not Available | Positive | 3611711 - 3612595 | 32728.3 |
| duf3872 domain-containing protein | DW035_15625 | Not Available | Positive | 3612609 - 3613106 | 19011.6 |
| integrase | DW035_15635 | Not Available | Positive | 3613455 - 3614687 | 46860.0 |
| hypothetical protein | DW035_15640 | Not Available | Positive | 3614656 - 3615666 | 38605.2 |
| integrase | DW035_15645 | Not Available | Positive | 3615669 - 3616715 | 39295.3 |
| hypothetical protein | DW035_15650 | Not Available | Negative | 3616562 - 3617494 | 34994.1 |
| hypothetical protein | DW035_15655 | Not Available | Negative | 3617508 - 3617729 | 8906.61 |
| hypothetical protein | DW035_15660 | Not Available | Negative | 3617741 - 3617956 | 7815.03 |
| molybdenum abc transporter atp-binding protein | DW035_15665 | Not Available | Negative | 3617965 - 3618300 | 12988.4 |
| hypothetical protein | DW035_15670 | Not Available | Positive | 3618267 - 3618449 | 6837.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

