Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | DW035_01505 | Not Available | Negative | 343952 - 344221 | 10383.6 |
| hypothetical protein | DW035_01510 | Not Available | Negative | 344284 - 344490 | 7749.97 |
| translational gtpase typa | DW035_01515 | Not Available | Positive | 344480 - 346282 | 67417.4 |
| lta synthase family protein | DW035_01520 | Not Available | Negative | 346368 - 348341 | 75625.7 |
| serine/threonine protein phosphatase | DW035_01525 | Not Available | Positive | 348442 - 349806 | 52834.7 |
| mboat family protein | DW035_01530 | Not Available | Positive | 349818 - 351260 | 56457.5 |
| hypothetical protein | DW035_01535 | Not Available | Positive | 351291 - 352223 | 35890.1 |
| lipopolysaccharide biosynthesis protein | DW035_01540 | Not Available | Negative | 352288 - 353298 | 40235.5 |
| glycosyltransferase family 8 protein | DW035_01545 | Not Available | Positive | 353406 - 354332 | 36667.3 |
| capsular biosynthesis protein | DW035_01550 | Not Available | Positive | 354336 - 355235 | 35181.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

