Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_15570 | Not Available | Positive | 3600563 - 3603130 | 96966.0 |
| peptidase s41 | DW035_15575 | Not Available | Positive | 3603219 - 3604529 | 49949.5 |
| tonb-dependent receptor | DW035_15580 | Not Available | Positive | 3604768 - 3606323 | 57913.2 |
| conjugal transfer protein trai | DW035_15585 | Not Available | Positive | 3606324 - 3606767 | 17314.0 |
| conjugative transposon protein traj | DW035_15590 | Not Available | Positive | 3606772 - 3607776 | 37225.9 |
| conjugative transposon protein trak | DW035_15595 | Not Available | Positive | 3607809 - 3608432 | 24064.8 |
| duf3989 domain-containing protein | DW035_15600 | Not Available | Positive | 3608472 - 3608759 | 10855.1 |
| conjugative transposon protein tram | DW035_15605 | Not Available | Positive | 3608740 - 3610098 | 49103.2 |
| conjugative transposon protein tran | DW035_15610 | Not Available | Positive | 3610136 - 3611125 | 37337.0 |
| conjugal transfer protein trao | DW035_15615 | Not Available | Positive | 3611128 - 3611703 | 21040.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

