Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| steroid delta-isomerase | DW035_15515 | Not Available | Negative | 3589956 - 3590309 | 13706.5 |
| mobilization protein | DW035_15520 | Not Available | Negative | 3590398 - 3591801 | 54772.9 |
| dna primase | DW035_15525 | Not Available | Negative | 3592026 - 3592985 | 36887.9 |
| mobilization protein | DW035_15530 | Not Available | Negative | 3593200 - 3594276 | 41066.6 |
| duf3853 family protein | DW035_15535 | Not Available | Negative | 3594291 - 3594599 | 11154.8 |
| hypothetical protein | DW035_15540 | Not Available | Negative | 3594823 - 3595842 | 40585.0 |
| duf1016 family protein | DW035_15545 | Not Available | Negative | 3595853 - 3597145 | 49228.9 |
| site-specific integrase | DW035_15550 | Not Available | Negative | 3597212 - 3598492 | 50440.4 |
| lysozyme | DW035_15560 | Not Available | Positive | 3599036 - 3599554 | 19696.0 |
| glpgli family protein | DW035_15565 | Not Available | Positive | 3599714 - 3600553 | 32406.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

