Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DW035_15465 | Not Available | Negative | 3583578 - 3584435 | 34493.9 |
| transcription initiation factor iid | DW035_15470 | Not Available | Negative | 3584574 - 3585029 | 18378.3 |
| hypothetical protein | DW035_15475 | Not Available | Negative | 3585166 - 3585609 | 17962.5 |
| hypothetical protein | DW035_15480 | Not Available | Negative | 3585624 - 3585818 | 7701.55 |
| hypothetical protein | DW035_15485 | Not Available | Negative | 3585849 - 3586361 | 20210.2 |
| hypothetical protein | DW035_15490 | Not Available | Negative | 3586599 - 3587264 | 26165.9 |
| hypothetical protein | DW035_15495 | Not Available | Negative | 3587380 - 3587970 | 22803.2 |
| hypothetical protein | DW035_15500 | Not Available | Negative | 3588012 - 3588605 | 22853.0 |
| hypothetical protein | DW035_15505 | Not Available | Negative | 3588647 - 3589195 | 21792.0 |
| hypothetical protein | DW035_15510 | Not Available | Negative | 3589312 - 3589686 | 14644.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

