Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para family protein | DW035_15360 | Not Available | Positive | 3564756 - 3565538 | 29239.2 |
| duf3408 domain-containing protein | DW035_15365 | Not Available | Positive | 3565540 - 3565941 | 15421.3 |
| hypothetical protein | DW035_15370 | Not Available | Positive | 3565944 - 3566573 | 22620.8 |
| duf4134 domain-containing protein | DW035_15375 | Not Available | Positive | 3566744 - 3567040 | 10202.5 |
| duf4133 domain-containing protein | DW035_15380 | Not Available | Positive | 3567051 - 3567386 | 12842.2 |
| trag family conjugative transposon atpase | DW035_15385 | Not Available | Positive | 3567383 - 3569896 | 96210.5 |
| duf4141 domain-containing protein | DW035_15390 | Not Available | Positive | 3569908 - 3570132 | 8082.93 |
| duf4141 domain-containing protein | DW035_15395 | Not Available | Negative | 3570142 - 3570369 | 8432.3 |
| duf3876 domain-containing protein | DW035_15400 | Not Available | Negative | 3570449 - 3570721 | 10221.2 |
| trag family conjugative transposon atpase | DW035_15405 | Not Available | Negative | 3570728 - 3571330 | 22959.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

