Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dna primase/helicase | DW035_15300 | Not Available | Positive | 3552295 - 3554349 | 77263.9 |
| dihydrofolate reductase | DW035_15315 | Not Available | Positive | 3554767 - 3555285 | 19051.8 |
| type ia dna topoisomerase | DW035_15320 | Not Available | Negative | 3555382 - 3557469 | 76617.3 |
| duf3945 domain-containing protein | DW035_15325 | Not Available | Negative | 3557495 - 3558817 | 48972.8 |
| hypothetical protein | DW035_15330 | Not Available | Negative | 3558832 - 3558987 | 5788.94 |
| transcriptional regulator | DW035_15335 | Not Available | Negative | 3559091 - 3560428 | 50831.4 |
| conjugal transfer protein trag | DW035_15340 | Not Available | Negative | 3560487 - 3562496 | 77027.6 |
| mobilization protein | DW035_15345 | Not Available | Negative | 3562515 - 3563783 | 47384.5 |
| hypothetical protein | DW035_15350 | Not Available | Negative | 3563768 - 3564190 | 16065.3 |
| hypothetical protein | DW035_15355 | Not Available | Negative | 3564299 - 3564535 | 9023.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

