Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_15250 | Not Available | Negative | 3543421 - 3543663 | 9277.38 |
| phenylalanine--trna ligase subunit beta | DW035_15255 | Not Available | Negative | 3543673 - 3546135 | 90705.7 |
| replicative dna helicase | DW035_15260 | Not Available | Negative | 3546237 - 3547799 | 58135.9 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DW035_15265 | Not Available | Positive | 3547902 - 3548726 | 30890.0 |
| hypothetical protein | DW035_15270 | Not Available | Positive | 3548842 - 3549231 | 15947.6 |
| hypothetical protein | DW035_15275 | Not Available | Positive | 3549302 - 3549499 | 7606.5 |
| hypothetical protein | DW035_15280 | Not Available | Positive | 3549510 - 3550061 | 22001.9 |
| arac family transcriptional regulator | DW035_15285 | Not Available | Positive | 3550092 - 3550934 | 32578.3 |
| hypothetical protein | DW035_15290 | Not Available | Positive | 3550966 - 3551868 | 35718.1 |
| dna-binding protein | DW035_15295 | Not Available | Positive | 3551973 - 3552332 | 14278.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

