Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class a extended-spectrum beta-lactamase cfxa3 | DW035_15150 | Not Available | Negative | 3524940 - 3525905 | 35330.5 |
| is982 family transposase | DW035_15155 | Not Available | Positive | 3526080 - 3526985 | 35034.4 |
| hypothetical protein | DW035_15160 | Not Available | Positive | 3527004 - 3527388 | 14797.0 |
| dna-binding protein | DW035_15165 | Not Available | Positive | 3527473 - 3527763 | 11361.8 |
| site-specific integrase | DW035_15170 | Not Available | Negative | 3527853 - 3529058 | 46079.0 |
| dna-binding protein | DW035_15175 | Not Available | Positive | 3529319 - 3529597 | 10863.2 |
| site-specific integrase | DW035_15180 | Not Available | Negative | 3529695 - 3530930 | 48304.1 |
| Trna-asp | Not Available | Not Available | Positive | 3531167 - 3531243 | Not Available |
| imidazole glycerol phosphate synthase subunit hish | DW035_15190 | Not Available | Positive | 3531503 - 3532093 | 22107.7 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DW035_15195 | Not Available | Positive | 3532115 - 3532837 | 26231.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

