Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_01455 | Not Available | Positive | 335415 - 335618 | 7901.65 |
| reverse transcriptase | DW035_01460 | Not Available | Positive | 335615 - 336655 | 41355.7 |
| hypothetical protein | DW035_01465 | Not Available | Positive | 336636 - 337013 | 14475.0 |
| hypothetical protein | DW035_01470 | Not Available | Positive | 337013 - 337327 | 11648.0 |
| hypothetical protein | DW035_01475 | Not Available | Positive | 337333 - 340986 | 136801.0 |
| hypothetical protein | DW035_01480 | Not Available | Positive | 340991 - 341473 | 18559.9 |
| hypothetical protein | DW035_01485 | Not Available | Positive | 341549 - 342163 | 23563.2 |
| hypothetical protein | DW035_01490 | Not Available | Positive | 342160 - 342426 | 9519.91 |
| n-acetylmuramoyl-l-alanine amidase | DW035_01495 | Not Available | Positive | 342423 - 343022 | 22437.5 |
| hypothetical protein | DW035_01500 | Not Available | Positive | 343015 - 343602 | 22631.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

