Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_14950 | Not Available | Negative | 3472714 - 3472944 | 8918.65 |
| hypothetical protein | DW035_14955 | Not Available | Negative | 3473118 - 3474845 | 66069.9 |
| phage tail tape measure protein | DW035_14960 | Not Available | Negative | 3474842 - 3478555 | 137663.0 |
| hypothetical protein | DW035_14965 | Not Available | Negative | 3478557 - 3478982 | 15998.9 |
| structural protein p5 | DW035_14970 | Not Available | Negative | 3479024 - 3479437 | 15505.3 |
| hypothetical protein | DW035_14975 | Not Available | Negative | 3479434 - 3479877 | 16560.8 |
| hypothetical protein | DW035_14980 | Not Available | Negative | 3479984 - 3481207 | 45346.7 |
| crispr-associated endonuclease cas2 | DW035_14985 | Not Available | Negative | 3481344 - 3481676 | 12857.6 |
| type ii crispr-associated endonuclease cas1 | DW035_14990 | Not Available | Negative | 3481676 - 3482602 | 34868.4 |
| type ii crispr rna-guided endonuclease cas9 | DW035_14995 | Not Available | Negative | 3482599 - 3487095 | 175530.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

