Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DW035_14900 | Not Available | Positive | 3466351 - 3466992 | 24304.3 |
| alanine:cation symporter family protein | DW035_14905 | Not Available | Positive | 3467001 - 3468401 | 50449.4 |
| hypothetical protein | DW035_14910 | Not Available | Positive | 3468448 - 3469077 | 24221.0 |
| uracil-dna glycosylase family protein | DW035_14915 | Not Available | Positive | 3469074 - 3469670 | 22974.7 |
| Trna-trp | Not Available | Not Available | Positive | 3469744 - 3469819 | Not Available |
| integrase | DW035_14925 | Not Available | Positive | 3469946 - 3471112 | 45771.9 |
| hypothetical protein | DW035_14930 | Not Available | Negative | 3471195 - 3471431 | 9156.05 |
| hypothetical protein | DW035_14935 | Not Available | Negative | 3471409 - 3471621 | 8236.79 |
| hypothetical protein | DW035_14940 | Not Available | Negative | 3471621 - 3471875 | 9271.51 |
| duf2335 domain-containing protein | DW035_14945 | Not Available | Negative | 3472290 - 3472721 | 16102.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

