Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | DW035_14845 | Not Available | Positive | 3456397 - 3456505 | 4173.99 |
| mobilization protein | DW035_14855 | Not Available | Positive | 3458006 - 3458430 | 16941.8 |
| radical sam mobile pair protein b | DW035_14860 | Not Available | Negative | 3458577 - 3459452 | 33883.9 |
| radical sam mobile pair protein a | DW035_14865 | Not Available | Negative | 3459449 - 3460117 | 26048.5 |
| cupin domain-containing protein | DW035_14870 | Not Available | Negative | 3460141 - 3460605 | 16922.2 |
| mbl fold metallo-hydrolase | DW035_14875 | Not Available | Negative | 3460639 - 3461418 | 28812.0 |
| arac family transcriptional regulator | DW035_14880 | Not Available | Positive | 3461555 - 3462454 | 35843.5 |
| Trna-ser | Not Available | Not Available | Positive | 3462678 - 3462765 | Not Available |
| duf255 domain-containing protein | DW035_14890 | Not Available | Positive | 3463031 - 3465037 | 74123.2 |
| serine dehydratase subunit alpha family protein | DW035_14895 | Not Available | Positive | 3465043 - 3466338 | 45843.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

