Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DW035_14795 | Not Available | Positive | 3442269 - 3445940 | 144050.0 |
| hypothetical protein | DW035_14800 | Not Available | Positive | 3445944 - 3446819 | 34048.9 |
| hypothetical protein | DW035_14805 | Not Available | Positive | 3446894 - 3450364 | 132524.0 |
| mbl fold metallo-hydrolase | DW035_14810 | Not Available | Positive | 3450430 - 3451209 | 30181.9 |
| duf3784 domain-containing protein | DW035_14815 | Not Available | Negative | 3451206 - 3451514 | 11507.6 |
| dna mismatch endonuclease vsr | DW035_14820 | Not Available | Negative | 3451525 - 3452049 | 20888.1 |
| hypothetical protein | DW035_14825 | Not Available | Positive | 3452340 - 3452939 | 22755.2 |
| sam-dependent dna methyltransferase | DW035_14830 | Not Available | Positive | 3452982 - 3454904 | 72327.2 |
| fic family protein | DW035_14835 | Not Available | Positive | 3454901 - 3455980 | 40523.4 |
| restriction endonuclease subunit s | DW035_14840 | Not Available | Positive | 3455977 - 3456378 | 14596.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

