Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | DW035_14740 | Not Available | Positive | 3432204 - 3433250 | 38146.8 |
| flavin reductase family protein | DW035_14745 | Not Available | Positive | 3433281 - 3433841 | 20340.3 |
| hypothetical protein | DW035_14750 | Not Available | Negative | 3433919 - 3435382 | 55430.1 |
| aaa family atpase | DW035_14755 | Not Available | Positive | 3435566 - 3437113 | 59429.7 |
| duf1847 domain-containing protein | DW035_14760 | Not Available | Negative | 3437195 - 3437833 | 23970.6 |
| rna methyltransferase | DW035_14765 | Not Available | Positive | 3438207 - 3439016 | 29499.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DW035_14775 | Not Available | Negative | 3439388 - 3439786 | 14620.7 |
| duf4112 domain-containing protein | DW035_14780 | Not Available | Negative | 3439829 - 3440320 | 18744.7 |
| hypothetical protein | DW035_14785 | Not Available | Positive | 3440511 - 3441716 | 48102.9 |
| hypothetical protein | DW035_14790 | Not Available | Positive | 3441734 - 3442285 | 21442.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

