Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_14625 | Not Available | Negative | 3414633 - 3415289 | 25435.3 |
| duf3872 domain-containing protein | DW035_14630 | Not Available | Negative | 3415276 - 3415725 | 17218.2 |
| conjugal transfer protein | DW035_14635 | Not Available | Negative | 3415750 - 3416331 | 21520.0 |
| conjugative transposon protein tran | DW035_14640 | Not Available | Negative | 3416335 - 3417273 | 35670.0 |
| conjugative transposon protein tram | DW035_14645 | Not Available | Negative | 3417310 - 3418701 | 50637.0 |
| hypothetical protein | DW035_14650 | Not Available | Negative | 3418722 - 3419888 | 44729.1 |
| duf3989 domain-containing protein | DW035_14655 | Not Available | Negative | 3419863 - 3420147 | 10466.9 |
| conjugative transposon protein traj | DW035_14665 | Not Available | Negative | 3420826 - 3421830 | 37401.1 |
| duf4141 domain-containing protein | DW035_14670 | Not Available | Negative | 3421883 - 3422512 | 23380.0 |
| duf3876 domain-containing protein | DW035_14675 | Not Available | Negative | 3422517 - 3422879 | 13690.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

