Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb/repb/spo0j family partition protein | DW035_14575 | Not Available | Positive | 3406338 - 3408050 | 65084.7 |
| hypothetical protein | DW035_14580 | Not Available | Positive | 3408160 - 3408762 | 24102.1 |
| hypothetical protein | DW035_14585 | Not Available | Positive | 3408759 - 3408980 | 8094.7 |
| hypothetical protein | DW035_14590 | Not Available | Negative | 3408991 - 3409356 | 13575.7 |
| dna repair protein | DW035_14595 | Not Available | Positive | 3409358 - 3409801 | 16239.4 |
| hypothetical protein | DW035_14600 | Not Available | Negative | 3409798 - 3410043 | 8907.33 |
| hypothetical protein | DW035_14605 | Not Available | Positive | 3410205 - 3412499 | 85257.7 |
| hypothetical protein | DW035_14610 | Not Available | Positive | 3412509 - 3412859 | 13260.0 |
| helix-turn-helix transcriptional regulator | DW035_14615 | Not Available | Negative | 3412800 - 3413561 | 29329.1 |
| hypothetical protein | DW035_14620 | Not Available | Negative | 3413753 - 3414601 | 32313.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

