Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hit domain-containing protein | DW035_14420 | Not Available | Negative | 3361422 - 3362330 | 34815.3 |
| hnh endonuclease | DW035_14425 | Not Available | Negative | 3362336 - 3363409 | 42248.7 |
| hypothetical protein | DW035_14430 | Not Available | Negative | 3363515 - 3364960 | 56332.2 |
| hypothetical protein | DW035_14435 | Not Available | Negative | 3365037 - 3368624 | 141182.0 |
| type i restriction endonuclease subunit r | DW035_14440 | Not Available | Negative | 3368672 - 3371824 | 122344.0 |
| tonb-dependent receptor | DW035_14445 | Not Available | Negative | 3371840 - 3373060 | 47660.7 |
| restriction endonuclease | DW035_14450 | Not Available | Negative | 3373057 - 3374595 | 58536.4 |
| restriction endonuclease subunit s | DW035_14455 | Not Available | Negative | 3374919 - 3375749 | 31519.3 |
| s9 family peptidase | DW035_14465 | Not Available | Negative | 3376498 - 3378723 | 83812.8 |
| sorbitol dehydrogenase | DW035_14470 | Not Available | Negative | 3378988 - 3380004 | 36313.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

