Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_14215 | Not Available | Positive | 3318174 - 3318512 | 12717.2 |
| site-specific integrase | DW035_14225 | Not Available | Positive | 3318793 - 3320004 | 46176.2 |
| duf3575 domain-containing protein | DW035_14230 | Not Available | Positive | 3320383 - 3320958 | 21924.4 |
| duf3868 domain-containing protein | DW035_14235 | Not Available | Positive | 3320972 - 3322453 | 55748.5 |
| hypothetical protein | DW035_14240 | Not Available | Positive | 3322515 - 3323669 | 42123.4 |
| hypothetical protein | DW035_14245 | Not Available | Positive | 3323742 - 3324647 | 33123.4 |
| hypothetical protein | DW035_14250 | Not Available | Positive | 3324666 - 3326219 | 57331.0 |
| hypothetical protein | DW035_14255 | Not Available | Positive | 3326262 - 3328535 | 84572.0 |
| hypothetical protein | DW035_14260 | Not Available | Positive | 3328562 - 3331714 | 117784.0 |
| duf5106 domain-containing protein | DW035_14265 | Not Available | Positive | 3331786 - 3332682 | 34037.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

