Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prtrc system protein b | DW035_14095 | Not Available | Positive | 3285580 - 3286281 | 26750.4 |
| prtrc system thif family protein | DW035_14100 | Not Available | Positive | 3286278 - 3287060 | 29278.4 |
| dna-binding protein | DW035_14105 | Not Available | Negative | 3287116 - 3287421 | 11751.3 |
| hypothetical protein | DW035_14110 | Not Available | Negative | 3288061 - 3288477 | 16373.4 |
| nucleotidyltransferase | DW035_14115 | Not Available | Negative | 3288478 - 3289701 | 46830.5 |
| hnh endonuclease | DW035_14120 | Not Available | Negative | 3289705 - 3290820 | 42549.0 |
| wyl domain-containing protein | DW035_14125 | Not Available | Negative | 3290821 - 3291864 | 40596.1 |
| type i restriction endonuclease subunit r | DW035_14130 | Not Available | Negative | 3291939 - 3296264 | 164821.0 |
| duf262 domain-containing protein | DW035_14135 | Not Available | Negative | 3296281 - 3298917 | 103392.0 |
| duf262 domain-containing protein | DW035_14140 | Not Available | Negative | 3298865 - 3300799 | 76394.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

