Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase | DW035_14040 | Not Available | Positive | 3277972 - 3279078 | 42973.8 |
| hypothetical protein | DW035_14045 | Not Available | Positive | 3279190 - 3279612 | 16379.6 |
| hypothetical protein | DW035_14050 | Not Available | Positive | 3279660 - 3280238 | 22302.3 |
| hypothetical protein | DW035_14055 | Not Available | Positive | 3280380 - 3280805 | 17163.5 |
| cyclopropane-fatty-acyl-phospholipid synthase | DW035_14060 | Not Available | Positive | 3280889 - 3281251 | 14149.2 |
| duf1911 domain-containing protein | DW035_14065 | Not Available | Positive | 3281308 - 3282009 | 28161.5 |
| hypothetical protein | DW035_14070 | Not Available | Positive | 3282019 - 3282540 | 19807.1 |
| hypothetical protein | DW035_14075 | Not Available | Positive | 3282634 - 3283101 | 17160.9 |
| hypothetical protein | DW035_14080 | Not Available | Negative | 3283148 - 3284191 | 39819.3 |
| peptidase | DW035_14090 | Not Available | Positive | 3284465 - 3285574 | 44142.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

