Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna cytosine methyltransferase | DW035_01345 | Not Available | Negative | 318892 - 319695 | 30744.0 |
| hypothetical protein | DW035_01355 | Not Available | Negative | 319976 - 320182 | 7679.23 |
| hypothetical protein | DW035_01365 | Not Available | Negative | 320468 - 320647 | 6631.05 |
| hypothetical protein | DW035_01370 | Not Available | Negative | 320658 - 320897 | 9214.21 |
| hypothetical protein | DW035_01375 | Not Available | Negative | 321083 - 321448 | 14330.3 |
| hypothetical protein | DW035_01380 | Not Available | Positive | 321827 - 322414 | 21841.6 |
| hypothetical protein | DW035_01385 | Not Available | Positive | 322426 - 323073 | 23411.2 |
| hypothetical protein | DW035_01390 | Not Available | Positive | 323087 - 324316 | 46180.5 |
| hypothetical protein | DW035_01395 | Not Available | Positive | 324329 - 324676 | 12697.3 |
| hypothetical protein | DW035_01400 | Not Available | Positive | 324680 - 325006 | 11880.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

