Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4276 family protein | DW035_13840 | Not Available | Positive | 3224629 - 3225282 | 24965.9 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DW035_13845 | Not Available | Positive | 3225351 - 3226112 | 28219.7 |
| insulinase family protein | DW035_13850 | Not Available | Positive | 3226109 - 3227401 | 49252.0 |
| phosphatidylinositol-4-phosphate 5-kinase | DW035_13855 | Not Available | Positive | 3227467 - 3228594 | 42857.1 |
| inositol monophosphatase | DW035_13860 | Not Available | Positive | 3228594 - 3229376 | 29040.4 |
| duf2461 domain-containing protein | DW035_13865 | Not Available | Positive | 3229450 - 3230115 | 25777.6 |
| duf386 domain-containing protein | DW035_13870 | Not Available | Positive | 3230144 - 3230587 | 16440.9 |
| 1,4-alpha-glucan-branching enzyme | DW035_13875 | Not Available | Positive | 3230606 - 3232618 | 77897.2 |
| hypothetical protein | DW035_13880 | Not Available | Positive | 3232630 - 3233781 | 44396.6 |
| hypothetical protein | DW035_13885 | Not Available | Positive | 3233765 - 3234022 | 9774.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

