Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit delta | DW035_13580 | Not Available | Positive | 3161543 - 3162097 | 20754.5 |
| f0f1 atp synthase subunit alpha | DW035_13585 | Not Available | Positive | 3162179 - 3163768 | 57231.1 |
| f0f1 atp synthase subunit gamma | DW035_13590 | Not Available | Positive | 3163774 - 3164661 | 32751.5 |
| hypothetical protein | DW035_13595 | Not Available | Negative | 3164865 - 3165266 | 16027.6 |
| had family phosphatase | DW035_13600 | Not Available | Negative | 3165480 - 3166106 | 23656.0 |
| rlua family pseudouridine synthase | DW035_13605 | Not Available | Negative | 3166116 - 3167042 | 35886.5 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DW035_13610 | Not Available | Negative | 3167084 - 3168502 | 53947.8 |
| pyruvate, phosphate dikinase | DW035_13615 | Not Available | Positive | 3168715 - 3171441 | 100703.0 |
| hypothetical protein | DW035_13620 | Not Available | Positive | 3171560 - 3172135 | 21963.0 |
| adp-ribosylglycohydrolase family protein | DW035_13625 | Not Available | Negative | 3172289 - 3173083 | 29105.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

