Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4836 family protein | DW035_13530 | Not Available | Positive | 3153153 - 3154658 | 55666.5 |
| atp-binding cassette domain-containing protein | DW035_13535 | Not Available | Positive | 3154737 - 3155381 | 24437.5 |
| abc transporter permease | DW035_13540 | Not Available | Positive | 3155403 - 3156590 | 43546.0 |
| hypothetical protein | DW035_13545 | Not Available | Positive | 3156622 - 3157038 | 15716.3 |
| f0f1 atp synthase subunit beta | DW035_13550 | Not Available | Positive | 3157363 - 3158892 | 56002.2 |
| f0f1 atp synthase subunit epsilon | DW035_13555 | Not Available | Positive | 3158930 - 3159175 | 8718.61 |
| hypothetical protein | DW035_13560 | Not Available | Positive | 3159245 - 3159736 | 19026.0 |
| atp synthase f0 subunit a | DW035_13565 | Not Available | Positive | 3159696 - 3160712 | 36968.8 |
| atp synthase f0 subunit c | DW035_13570 | Not Available | Positive | 3160759 - 3161013 | 8189.58 |
| atp synthase f0 subunit b | DW035_13575 | Not Available | Positive | 3161033 - 3161536 | 19019.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

