Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DW035_13320 | Not Available | Negative | 3102895 - 3104538 | 62458.3 |
| hypothetical protein | DW035_13325 | Not Available | Negative | 3104601 - 3105560 | 36787.1 |
| u32 family peptidase | DW035_13330 | Not Available | Negative | 3105557 - 3107398 | 69418.5 |
| homoserine o-succinyltransferase | DW035_13335 | Not Available | Negative | 3107398 - 3108321 | 36043.1 |
| lysr family transcriptional regulator | DW035_13340 | Not Available | Negative | 3108423 - 3109316 | 33353.6 |
| tolc family protein | DW035_13355 | Not Available | Negative | 3110869 - 3112044 | 44409.1 |
| acrb/acrd/acrf family protein | DW035_13360 | Not Available | Negative | 3112041 - 3115154 | 113663.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW035_13365 | Not Available | Negative | 3115167 - 3116321 | 41684.4 |
| hypothetical protein | DW035_13370 | Not Available | Negative | 3116403 - 3116825 | 15632.6 |
| peptidylprolyl isomerase | DW035_13375 | Not Available | Negative | 3117234 - 3117908 | 25074.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

