Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_13270 | Not Available | Negative | 3097023 - 3097280 | 10097.1 |
| hypothetical protein | DW035_13275 | Not Available | Negative | 3097299 - 3097517 | 8863.69 |
| duf1273 family protein | DW035_13280 | Not Available | Negative | 3097524 - 3098096 | 22427.3 |
| hypothetical protein | DW035_13285 | Not Available | Negative | 3098024 - 3098287 | 9925.62 |
| hypothetical protein | DW035_13290 | Not Available | Positive | 3098854 - 3099126 | 10037.8 |
| hypothetical protein | DW035_13295 | Not Available | Negative | 3099352 - 3099681 | 13256.1 |
| ribonucleotide-diphosphate reductase subunit beta | DW035_13300 | Not Available | Negative | 3099683 - 3100603 | 35530.9 |
| hypothetical protein | DW035_13305 | Not Available | Negative | 3100706 - 3101119 | 16006.3 |
| site-specific integrase | DW035_13310 | Not Available | Negative | 3101165 - 3102424 | 48660.0 |
| Trna-lys | Not Available | Not Available | Positive | 3102699 - 3102771 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

