Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_01105 | Not Available | Positive | 286497 - 287747 | 48007.3 |
| Trna-arg | Not Available | Not Available | Positive | 288142 - 288216 | Not Available |
| transposase | DW035_01115 | Not Available | Positive | 288311 - 289654 | 52390.8 |
| hypothetical protein | DW035_01120 | Not Available | Negative | 290047 - 290304 | 9756.96 |
| hypothetical protein | DW035_01125 | Not Available | Negative | 290304 - 290516 | 8187.89 |
| xre family transcriptional regulator | DW035_01130 | Not Available | Negative | 290549 - 291031 | 18243.2 |
| xre family transcriptional regulator | DW035_01135 | Not Available | Positive | 291204 - 291449 | 9257.27 |
| hypothetical protein | DW035_01280 | Not Available | Positive | 310694 - 310882 | 7724.22 |
| hypothetical protein | DW035_01285 | Not Available | Positive | 310869 - 313331 | 94362.5 |
| hypothetical protein | DW035_01290 | Not Available | Negative | 313407 - 313964 | 21919.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

