Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_12910 | Not Available | Negative | 2999816 - 3000181 | 13789.6 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | DW035_12915 | Not Available | Negative | 3000507 - 3001775 | 46708.7 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | DW035_12920 | Not Available | Negative | 3001794 - 3002417 | 22312.3 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | DW035_12925 | Not Available | Negative | 3002454 - 3003092 | 22950.9 |
| na(+)-translocating nadh-quinone reductase subunit c | DW035_12930 | Not Available | Negative | 3003107 - 3003787 | 24536.1 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | DW035_12935 | Not Available | Negative | 3003802 - 3004977 | 42504.4 |
| na(+)-translocating nadh-quinone reductase subunit a | DW035_12940 | Not Available | Negative | 3005003 - 3006355 | 49390.8 |
| aminopeptidase | DW035_12955 | Not Available | Negative | 3011059 - 3012453 | 52539.0 |
| na+/h+ antiporter nhac | DW035_12960 | Not Available | Negative | 3012483 - 3013928 | 51183.0 |
| translocation/assembly module tamb | DW035_12965 | Not Available | Positive | 3014186 - 3018751 | 171388.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

