Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | DW035_12780 | Not Available | Negative | 2969748 - 2970668 | 35083.0 |
| hypothetical protein | DW035_12785 | Not Available | Negative | 2970701 - 2970916 | 8222.83 |
| hypothetical protein | DW035_12800 | Not Available | Negative | 2972831 - 2974048 | 45299.7 |
| dna gyrase subunit a | DW035_12805 | Not Available | Negative | 2974097 - 2976643 | 95895.8 |
| hypothetical protein | DW035_12810 | Not Available | Positive | 2976680 - 2976883 | 8166.34 |
| atp-dependent clp protease atp-binding subunit | DW035_12815 | Not Available | Positive | 2976889 - 2979426 | 95318.7 |
| molecular chaperone htpg | DW035_12820 | Not Available | Positive | 2979546 - 2981597 | 78410.4 |
| phosphoserine phosphatase serb | DW035_12825 | Not Available | Positive | 2981723 - 2982955 | 45792.7 |
| atp-dependent helicase | DW035_12830 | Not Available | Positive | 2982976 - 2984250 | 47562.6 |
| prolipoprotein diacylglyceryl transferase | DW035_12850 | Not Available | Positive | 2988582 - 2989409 | 31747.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

