Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-galactopyranose mutase | DW035_12670 | Not Available | Negative | 2944070 - 2945197 | 43667.9 |
| duf4422 domain-containing protein | DW035_12675 | Not Available | Negative | 2945221 - 2945997 | 30854.2 |
| glycosyltransferase | DW035_12680 | Not Available | Negative | 2946019 - 2947029 | 39180.0 |
| glycosyltransferase | DW035_12685 | Not Available | Negative | 2947057 - 2948196 | 44291.5 |
| hypothetical protein | DW035_12690 | Not Available | Negative | 2948183 - 2950147 | 77922.0 |
| hypothetical protein | DW035_12695 | Not Available | Negative | 2950169 - 2951143 | 38073.1 |
| hypothetical protein | DW035_12700 | Not Available | Negative | 2951140 - 2951892 | 27940.3 |
| glycosyltransferase family 1 protein | DW035_12705 | Not Available | Negative | 2951879 - 2953048 | 45082.4 |
| hypothetical protein | DW035_12710 | Not Available | Negative | 2953061 - 2954323 | 48582.1 |
| lipopolysaccharide biosynthesis protein | DW035_12725 | Not Available | Negative | 2955940 - 2957481 | 57992.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

