Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide sugar dehydrogenase | DW035_12615 | Not Available | Negative | 2930552 - 2931880 | 49709.2 |
| bifunctional fucokinase/l-fucose-1-p-guanylyltransferase | DW035_12620 | Not Available | Negative | 2931948 - 2934791 | 105743.0 |
| hypothetical protein | DW035_12625 | Not Available | Negative | 2934788 - 2935663 | 33779.2 |
| udp-galactopyranose mutase | DW035_12630 | Not Available | Negative | 2935872 - 2936999 | 43641.9 |
| phage tail protein | DW035_12640 | Not Available | Negative | 2937739 - 2938200 | 16887.0 |
| duf4435 domain-containing protein | DW035_12645 | Not Available | Negative | 2938249 - 2939148 | 34894.7 |
| hypothetical protein | DW035_12650 | Not Available | Negative | 2939151 - 2940440 | 50559.1 |
| hnh endonuclease | DW035_12655 | Not Available | Negative | 2940469 - 2940825 | 13909.2 |
| dtdp-glucose 4,6-dehydratase | DW035_12660 | Not Available | Negative | 2940982 - 2942127 | 44211.2 |
| nucleotide sugar dehydrogenase | DW035_12665 | Not Available | Negative | 2942736 - 2944073 | 50093.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

