Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_12565 | Not Available | Positive | 2919963 - 2920679 | 26205.1 |
| hypothetical protein | DW035_12570 | Not Available | Negative | 2920663 - 2921271 | 22585.2 |
| dna translocase ftsk | DW035_12575 | Not Available | Negative | 2921312 - 2923888 | 95493.0 |
| duf5063 domain-containing protein | DW035_12580 | Not Available | Positive | 2923978 - 2924601 | 23878.2 |
| 3'-5' exonuclease domain-containing protein 2 | DW035_12585 | Not Available | Positive | 2924621 - 2925262 | 24711.8 |
| class i sam-dependent rrna methyltransferase | DW035_12590 | Not Available | Positive | 2925280 - 2926467 | 44351.0 |
| undecaprenyl-phosphate glucose phosphotransferase | DW035_12595 | Not Available | Negative | 2926559 - 2927968 | 54912.2 |
| hypothetical protein | DW035_12600 | Not Available | Negative | 2928057 - 2928506 | 16722.0 |
| hypothetical protein | DW035_12605 | Not Available | Negative | 2928503 - 2930002 | 56716.2 |
| l-rhamnose mutarotase | DW035_12610 | Not Available | Negative | 2930140 - 2930469 | 12949.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

