Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine phosphate synthase | DW035_12460 | Not Available | Negative | 2901268 - 2901927 | 24224.3 |
| sulfur carrier protein this | DW035_12465 | Not Available | Negative | 2901917 - 2902117 | 7174.76 |
| hypothetical protein | DW035_12470 | Not Available | Negative | 2902354 - 2903025 | 26489.1 |
| metallophosphoesterase | DW035_12475 | Not Available | Negative | 2903006 - 2903752 | 28803.5 |
| yitt family protein | DW035_12480 | Not Available | Negative | 2903942 - 2904904 | 34872.2 |
| flavodoxin flda | DW035_12485 | Not Available | Positive | 2905059 - 2905565 | 17806.5 |
| duf2023 family protein | DW035_12490 | Not Available | Positive | 2905608 - 2905967 | 14010.5 |
| duf454 domain-containing protein | DW035_12500 | Not Available | Positive | 2906316 - 2906681 | 13779.6 |
| aminodeoxychorismate synthase component i | DW035_12505 | Not Available | Positive | 2906674 - 2907678 | 38216.4 |
| 4-amino-4-deoxychorismate lyase | DW035_12510 | Not Available | Positive | 2907662 - 2908255 | 22997.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

