Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s41 family peptidase | DW035_01055 | Not Available | Positive | 276391 - 278073 | 62647.8 |
| dna-binding response regulator | DW035_01060 | Not Available | Negative | 278218 - 278919 | 26364.6 |
| hypothetical protein | DW035_01065 | Not Available | Positive | 279139 - 279732 | 22985.6 |
| hypothetical protein | DW035_01070 | Not Available | Positive | 279768 - 280685 | 35211.1 |
| abc transporter atp-binding protein | DW035_01075 | Not Available | Positive | 280682 - 281332 | 24463.8 |
| hypothetical protein | DW035_01080 | Not Available | Positive | 281470 - 282531 | 41396.7 |
| sensor histidine kinase | DW035_01085 | Not Available | Negative | 282695 - 284029 | 50127.3 |
| duf3836 domain-containing protein | DW035_01090 | Not Available | Positive | 284234 - 284494 | 9794.54 |
| hypothetical protein | DW035_01095 | Not Available | Positive | 284565 - 284885 | 12351.8 |
| sensor histidine kinase | DW035_01100 | Not Available | Negative | 285016 - 286326 | 49932.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

