Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate synthase | DW035_12080 | Not Available | Positive | 2807649 - 2808917 | 46651.6 |
| susc/raga family tonb-linked outer membrane protein | DW035_12085 | Not Available | Positive | 2809337 - 2812492 | 116786.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW035_12090 | Not Available | Positive | 2812513 - 2814063 | 57966.9 |
| hypothetical protein | DW035_12095 | Not Available | Positive | 2814094 - 2814621 | 19134.3 |
| hypothetical protein | DW035_12100 | Not Available | Positive | 2814806 - 2815177 | 14697.1 |
| hypothetical protein | DW035_12115 | Not Available | Positive | 2816345 - 2816668 | 12474.5 |
| hypothetical protein | DW035_12120 | Not Available | Positive | 2816692 - 2817498 | 31021.1 |
| hypothetical protein | DW035_12125 | Not Available | Positive | 2817517 - 2818149 | 23737.4 |
| hypothetical protein | DW035_12130 | Not Available | Negative | 2818322 - 2818780 | 17452.0 |
| hypothetical protein | DW035_12135 | Not Available | Negative | 2818791 - 2819579 | 29506.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

