Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2490 domain-containing protein | DW035_12030 | Not Available | Positive | 2795941 - 2796603 | 25794.5 |
| nitroreductase | DW035_12035 | Not Available | Positive | 2796615 - 2797118 | 19126.1 |
| oxaloacetate decarboxylase | DW035_12040 | Not Available | Positive | 2797263 - 2797520 | 8942.43 |
| oxaloacetate decarboxylase | DW035_12045 | Not Available | Positive | 2797550 - 2799409 | 69037.6 |
| sodium ion-translocating decarboxylase subunit beta | DW035_12050 | Not Available | Positive | 2799409 - 2800644 | 44246.8 |
| hypothetical protein | DW035_12055 | Not Available | Positive | 2800797 - 2802461 | 61742.8 |
| dna helicase recq | DW035_12060 | Not Available | Negative | 2802458 - 2804281 | 69111.5 |
| dihydrofolate reductase | DW035_12065 | Not Available | Positive | 2804469 - 2806436 | 74538.6 |
| dna alkylation repair protein | DW035_12070 | Not Available | Positive | 2806439 - 2807107 | 25877.7 |
| transcriptional repressor | DW035_12075 | Not Available | Positive | 2807161 - 2807619 | 17751.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

